Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797895.1_cds_XP_016457179.1_5051
CDS Infomation

[gene=LOC107781047] [db_xref=GeneID:107781047] [protein=SUPPRESSOR OF ABI3-5-like isoform X3] [protein_id=XP_016457179.1] [location=join(29919..29966,30166..30206,30432..30641,30753..31176,31250..31321,31443..31535,31617..31696,32305..32458,33163..33247,33919..34010,34091..34159,34607..34864)] [gbkey=CDS]
Sequence

ATGGATCCTGGTCGATATGGGCTCCATCATGGATGGGAAAATAACAGCGCTTTGGAGGGT
TATAGAGGAGTTCATGAGCCAGATTTCCGGGCTGGTGGTTCTTATGATGACGGGAGGTTT
CTAGATGATAGATTTTCGAGGGATGGTGTTTACTCACGGGGTGCCTATCACCGTGATATA
CTGGAAGGAGAGCACTACCCTCATCCGCCACCAGCAGTTGGACATTGGCCTCAAACAAGG
AGAAGAAGTTATGAAGAAGAGTATCCTGTGGAGAGAGATTCCAGGAGGCATGAGAAGCTG
CCTGCTAGGTATGGGGGACGCGAGCGTGATGACTACCCCTATGATGATTATGACTACAAA
CATCGTATGGCGCACCCGAACAGGGAGGATAACCGTGAAAGGGACCATGAGTACAGTAGA
TATAGTTATGACTCAGACTATGAAAGAGGCAGTGGGAAAGATGGTAATTGGAGACGACGT
GAATCCCGTGAGCGTGAACGTGACAAAGAATCGAGTCGTGAGAGGGATCCGAGTCCATAT
AGAAGACATGAGCATTCCCGCTCACGTTCTCGTGGTCGTGATGATCGCATGAGGTCAAGA
TCTCCTCGAAGTCGAAGTCATAGTCGCAGTCATAGAGAGGACAGTTATGATGATGGCCGA
TACGATAGAAGTGAGAGACGAAGAGATCGTGATGATAAAAGATACCATGACAATTATTCT
GTGGCCCCTTCAGCGACTGTTGTTGTCAAAGGCCTTTCACAGAAAACGACCGAAGAAGAT
TTGTATCAGATCCTTGCTGAGTGGGGGCCCCTACGCCATGTTCGTGTGATCAAAGAACGA
AATTCTGGCGTTTCTCGCGGATTTGCCTTTATTGATTTCCCTTCTGTGGGTGCGGCGCAA
GCAATGATGGATAAACTTGGGGATGAGGGTCTAGTTGTGGATGGTAGGAAGCTTTTCTTC
GAGTACAGTAGCAAGCCAACTGGAGGACCCGGTGGGCCTGGTAGTCTAGACAGTGCTTCA
AGATCTAACCATGGTAACCACCGGAGTATCACTGTTCCATCTGATTGGATGTGCACCATC
TGTGGATGTGTGAATTTTGCACGGCGGACATCTTGTTTTCAGTGTAATGAGCCACGGACA
GATGATGCTCCTCCAGCAGACATGGCATCATCCAACTCTAGCTCTCTGGGGAGGAGAGGC
GAAGCAGGTCCCACACATGTCTTAGTTGTCCGTGGATTAGATGAAAATGCAGATGAGGAG
ATGCTTCGTTATGAATTTTCCAAACACGCTCCTATTAAGGATCTTCGTCTTGTCAGAGAC
AAGTTCACTCACGTCTCGAGGGGATTTGCATTTGTGCACTTCTATTCTGTGGAGGAAGCT
ACTAAAGCTCTTGAAGCAACAAACGGTACAACATTGGAGAAGAATGGGCAGATTCTTAGA
GTTGCATATGCAAAAAGTATCCTTGGACCAGGATCAAATGCTTCTCAGACTAGTAGCCTT
GCAGCTGCTGCTATTGAAGCAGCAACTTTTGCTCAACAGGTTCTCCTACTCTTTACCTTG
GTTATAGCTCTGTTCATTTTTTTTGTTACGCTGGGGAAATTTGCTGCCTACAGATACCTT
TGTTAG

Peptide Sequence

PEP ID

XP_016457179.1
PEP Infomation

PREDICTED: SUPPRESSOR OF ABI3-5-like isoform X3 [Nicotiana tabacum]
Sequence

MDPGRYGLHHGWENNSALEGYRGVHEPDFRAGGSYDDGRFLDDRFSRDGVYSRGAYHRDI
LEGEHYPHPPPAVGHWPQTRRRSYEEEYPVERDSRRHEKLPARYGGRERDDYPYDDYDYK
HRMAHPNREDNRERDHEYSRYSYDSDYERGSGKDGNWRRRESRERERDKESSRERDPSPY
RRHEHSRSRSRGRDDRMRSRSPRSRSHSRSHREDSYDDGRYDRSERRRDRDDKRYHDNYS
VAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGVSRGFAFIDFPSVGAAQ
AMMDKLGDEGLVVDGRKLFFEYSSKPTGGPGGPGSLDSASRSNHGNHRSITVPSDWMCTI
CGCVNFARRTSCFQCNEPRTDDAPPADMASSNSSSLGRRGEAGPTHVLVVRGLDENADEE
MLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFYSVEEATKALEATNGTTLEKNGQILR
VAYAKSILGPGSNASQTSSLAAAAIEAATFAQQVLLLFTLVIALFIFFVTLGKFAAYRYL
C

Transcript Sequence

Gene sequence data has not been registered.